Enable Travis tests for geomancer

* Added a flag to disable plotting when running headless on Travis

PiperOrigin-RevId: 368229292

.travis.yml

@@ -12,6 +12,7 @@ env:
     - PROJECT="avae"
     # - PROJECT="cs_gan"  # TODO(b/184845450): Fix and re-enable
     - PROJECT="gated_linear_networks"
+    - PROJECT="geomancer"
     - PROJECT="iodine"
     - PROJECT="kfac_ferminet_alpha"
     - PROJECT="learning_to_simulate"

geomancer/run.sh

@@ -13,9 +13,9 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
-python3 -m venv geomancer-venv
+python3 -m venv /tmp/geomancer-venv
-source geomancer-venv/bin/activate
+source /tmp/geomancer-venv/bin/activate
-pip3 install .
+pip3 install -U pip
-python3 geomancer_test.py
+pip3 install geomancer/
-python3 train.py
+python3 -m geomancer.geomancer_test
-deactivate
+python3 geomancer/train.py --plot=False

geomancer/train.py

@@ -28,11 +28,14 @@ import numpy as np
 from scipy.stats import special_ortho_group
 from tqdm import tqdm
 
-flags.DEFINE_list('specification', ['S^2', 'S^2'], 'List of submanifolds')
+SPECIFICATION = flags.DEFINE_list(
-flags.DEFINE_integer('npts', 1000, 'Number of data points')
+    name='specification', default=['S^2', 'S^2'], help='List of submanifolds')
-flags.DEFINE_boolean('rotate', False, 'Apply random rotation to the data')
+NPTS = flags.DEFINE_integer(
-
+    name='npts', default=1000, help='Number of data points')
-FLAGS = flags.FLAGS
+ROTATE = flags.DEFINE_boolean(
+    name='rotate', default=False, help='Apply random rotation to the data')
+PLOT = flags.DEFINE_boolean(
+    name='plot', default=True, help='Whether to enable plotting')
 
 
 def make_so_tangent(q):
@@ -139,8 +142,8 @@ def make_product_manifold(specification, npts):
 
 def main(_):
   # Generate data and run GEOMANCER
-  data, dim, tangents = make_product_manifold(FLAGS.specification, FLAGS.npts)
+  data, dim, tangents = make_product_manifold(SPECIFICATION.value, NPTS.value)
-  if FLAGS.rotate:
+  if ROTATE.value:
     rot, _ = np.linalg.qr(np.random.randn(data.shape[1], data.shape[1]))
     data_rot = data @ rot.T
     components, spectrum = geomancer.fit(data_rot, dim)
@@ -149,46 +152,49 @@ def main(_):
     components, spectrum = geomancer.fit(data, dim)
     errors = geomancer.eval_aligned(components, tangents)
 
-  # Plot spectrum
-  plt.figure(figsize=(8, 6))
-  plt.scatter(np.arange(len(spectrum)), spectrum, s=100)
-  largest_gap = np.argmax(spectrum[1:]-spectrum[:-1]) + 1
-  plt.axvline(largest_gap, linewidth=2, c='r')
-  plt.xticks([])
-  plt.yticks(fontsize=18)
-  plt.xlabel('Index', fontsize=24)
-  plt.ylabel('Eigenvalue', fontsize=24)
-  plt.title('GeoManCEr Eigenvalue Spectrum', fontsize=24)
-
-  # Plot subspace bases
-  fig = plt.figure(figsize=(8, 6))
-  bases = components[0]
-  gs = gridspec.GridSpec(1, len(bases),
-                         width_ratios=[b.shape[1] for b in bases])
-  for i in range(len(bases)):
-    ax = plt.subplot(gs[i])
-    ax.imshow(bases[i])
-    ax.set_xticks([])
-    ax.set_yticks([])
-    ax.set_title(r'$T_{\mathbf{x}_1}\mathcal{M}_%d$' % (i+1), fontsize=18)
-  fig.canvas.set_window_title('GeoManCEr Results')
-
-  # Plot ground truth
-  fig = plt.figure(figsize=(8, 6))
-  gs = gridspec.GridSpec(1, len(tangents),
-                         width_ratios=[b.shape[2] for b in tangents])
-  for i, spec in enumerate(FLAGS.specification):
-    ax = plt.subplot(gs[i])
-    ax.imshow(tangents[i][0])
-    ax.set_xticks([])
-    ax.set_yticks([])
-    ax.set_title(r'$T_{\mathbf{x}_1}%s$' % spec, fontsize=18)
-  fig.canvas.set_window_title('Ground Truth')
-
   logging.info('Error between subspaces: %.2f +/- %.2f radians',
                np.mean(errors),
                np.std(errors))
-  plt.show()
+
+  if PLOT.value:
+
+    # Plot spectrum
+    plt.figure(figsize=(8, 6))
+    plt.scatter(np.arange(len(spectrum)), spectrum, s=100)
+    largest_gap = np.argmax(spectrum[1:]-spectrum[:-1]) + 1
+    plt.axvline(largest_gap, linewidth=2, c='r')
+    plt.xticks([])
+    plt.yticks(fontsize=18)
+    plt.xlabel('Index', fontsize=24)
+    plt.ylabel('Eigenvalue', fontsize=24)
+    plt.title('GeoManCEr Eigenvalue Spectrum', fontsize=24)
+
+    # Plot subspace bases
+    fig = plt.figure(figsize=(8, 6))
+    bases = components[0]
+    gs = gridspec.GridSpec(1, len(bases),
+                           width_ratios=[b.shape[1] for b in bases])
+    for i in range(len(bases)):
+      ax = plt.subplot(gs[i])
+      ax.imshow(bases[i])
+      ax.set_xticks([])
+      ax.set_yticks([])
+      ax.set_title(r'$T_{\mathbf{x}_1}\mathcal{M}_%d$' % (i+1), fontsize=18)
+    fig.canvas.set_window_title('GeoManCEr Results')
+
+    # Plot ground truth
+    fig = plt.figure(figsize=(8, 6))
+    gs = gridspec.GridSpec(1, len(tangents),
+                           width_ratios=[b.shape[2] for b in tangents])
+    for i, spec in enumerate(SPECIFICATION.value):
+      ax = plt.subplot(gs[i])
+      ax.imshow(tangents[i][0])
+      ax.set_xticks([])
+      ax.set_yticks([])
+      ax.set_title(r'$T_{\mathbf{x}_1}%s$' % spec, fontsize=18)
+    fig.canvas.set_window_title('Ground Truth')
+
+    plt.show()
 
 
 if __name__ == '__main__':